Gene: Lsat_1_v5_gn_1_121861

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_1_121861
  • Transcript Identifier Lsat_1_v5_gn_1_121861.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_1 : 197075401-197079526 : negative

Gene Family Information

  • ID HOM05D000226
  • #Genes/#Species 1818/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_1_121861.v5
  • pacid 38947655

Descriptions

  • Description KOG0484 - Transcription factor PHOX2/ARIX, contains HOX domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009913
ISO
PLAZA Integrative Orthologyepidermal cell differentiation AT4G04890
GO:0048497
ISO
PLAZA Integrative Orthologymaintenance of floral organ identity AT4G04890
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT4G04890
GO:2000033
ISO
PLAZA Integrative Orthologyregulation of seed dormancy process AT4G04890
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT4G04890
GO:0048825
ISO
PLAZA Integrative Orthologycotyledon development AT4G04890

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008289
IEA
InterProlipid binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G04890
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G04890

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G04890

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR002913 START domain
IPR042160 Homeobox-leucine zipper protein GLABRA2/ANL2/PDF2/ATML1-like
IPR001356 Homeobox domain
IPR023393 START-like domain superfamily
Mapman id Description
15.5.3.3 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP IV)