Gene: Lsat_1_v5_gn_0_39640
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_0_39640
- Transcript Identifier Lsat_1_v5_gn_0_39640.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_1 : 21076740-21079329 : positive
Gene Family Information
- ID HOM05D003924
- #Genes/#Species 178/96
- Phylogenetic origin
- ID ORTHO05D005911
- #Genes/#Species 150/86
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_0_39640.v5
- pacid 38945612
Descriptions
- Description PTHR22957:SF211 - RAB GTPASE ACTIVATOR PROTEIN-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000184 | IEA | InterPro | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | ISO | PLAZA Homology (enrichment) | RNA binding | HOM05D003924 |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D003924 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039762 | Nonsense-mediated mRNA decay protein Nmd2/UPF2 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |