Gene: Lj6g0008121

General Information

Structural Information

  • Species Lotus japonicus
  • Gene Identifier Lj6g0008121
  • Transcript Identifier Lj6g0008121.1
  • Gene Type Coding gene
  • Location chr6 : 2216824-2218860 : negative

Gene Family Information

  • ID HOM05D004511
  • #Genes/#Species 160/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lj6g0008121.Lj1.0v1
  • pacid 44935167

Descriptions

  • Description PTHR11361//PTHR11361:SF82 - DNA MISMATCH REPAIR MUTS RELATED PROTEINS // DNA MISMATCH REPAIR PROTEIN MSH1, MITOCHONDRIAL
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT3G24320
GO:0032042
ISO
PLAZA Integrative Orthologymitochondrial DNA metabolic process AT3G24320
GO:0000002
ISO
PLAZA Integrative Orthologymitochondrial genome maintenance AT3G24320

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT3G24320

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G24320
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G24320
GO:0042651
ISO
PLAZA Integrative Orthologythylakoid membrane AT3G24320
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT3G24320

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR045076 DNA mismatch repair MutS family
IPR035901 GIY-YIG endonuclease superfamily
Mapman id Description
13.5.8.5 Cell cycle organisation.organellar DNA replication.genome stability maintenance.regulatory factor (MSH1)