Gene: Lj5g0027611
General Information
Structural Information
- Species Lotus japonicus
- Gene Identifier Lj5g0027611
- Transcript Identifier Lj5g0027611.1
- Gene Type Coding gene
- Location chr5 : 1711998-1715326 : negative
Gene Family Information
- ID HOM05D000924
- #Genes/#Species 651/100
- Phylogenetic origin
- ID ORTHO05D001209
- #Genes/#Species 456/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lj5g0027611.Lj1.0v1
- pacid 44924717
Descriptions
- Description PF00270//PF00271//PF02889 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Sec63 Brl domain (Sec63)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001650 | Helicase, C-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR035892 | C2 domain superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR004179 | Sec63 domain |
| IPR014756 | Immunoglobulin E-set |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 16.2.7.1.4 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Brr2) |