Gene: Lj5C48T3
General Information
Structural Information
- Species Lonicera japonica
- Gene Identifier Lj5C48T3
- Transcript Identifier Lj5C48T3.1
- Gene Type Coding gene
- Location GWHAAZE00000005 : 4856635-4857384 : positive
Gene Family Information
- ID HOM05D000110
- #Genes/#Species 3051/96
- Phylogenetic origin
- ID ORTHO05D000024
- #Genes/#Species 3751/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Lj5C48T3.1
- Accession GWHGAAZE017346
- Accession GWHTAAZE017366
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT3G50410 |
| GO:0045787 | ISO | PLAZA Integrative Orthology | positive regulation of cell cycle | AT3G50410 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT3G50410 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT1G51700 |
| GO:0042545 | ISO | PLAZA Integrative Orthology | cell wall modification | AT3G50410 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT3G50410 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | Zm00001eb033670 |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | Zm00001eb033670 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G50410 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | Zm00001eb033670 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | Zm00001eb033670 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003851 | Zinc finger, Dof-type |
| Mapman id | Description |
|---|---|
| 15.5.1.5 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF) |