Gene: Lj1C183T3

General Information

Structural Information

Species Lonicera japonica
Gene Identifier Lj1C183T3
Transcript Identifier Lj1C183T3.1
Gene Type Coding gene
Location GWHAAZE00000001 : 18317484-18320499 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D004427
#Genes/#Species 162/93
Phylogenetic origin

ID ORTHO05D005381
#Genes/#Species 159/93
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Lj1C183T3.1
Accession GWHGAAZE000865
Accession GWHTAAZE000867

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006508	IEA	InterPro	proteolysis
GO:0000398	IEA	InterPro	mRNA splicing, via spliceosome

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008234	IEA	InterPro	cysteine-type peptidase activity
GO:0019784	ISO	PLAZA Integrative Orthology	NEDD8-specific protease activity	AT5G60190

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005689	IEA	InterPro	U12-type spliceosomal complex

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR040610	SNRNP25, ubiquitin-like domain
IPR003653	Ulp1 protease family, C-terminal catalytic domain
IPR029071	Ubiquitin-like domain superfamily
IPR038765	Papain-like cysteine peptidase superfamily
IPR039690	U11/U12 small nuclear ribonucleoprotein 25kDa protein

Mapman id	Description
16.2.4.2.2	RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).protein factor (U11/U12-25K)
19.2.3.3.2.3	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.deneddylase activities.deneddylase (DEN1)