Gene: Lj1A184T43

General Information

Structural Information

  • Species Lonicera japonica
  • Gene Identifier Lj1A184T43
  • Transcript Identifier Lj1A184T43.1
  • Gene Type Coding gene
  • Location GWHAAZE00000001 : 18434093-18438380 : positive

Gene Family Information

  • ID HOM05D000327
  • #Genes/#Species 1418/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Lj1A184T43.1
  • Accession GWHGAAZE000871
  • Accession GWHTAAZE000873

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT3G43750
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G43750

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G21420
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G43750

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031127 E3 ubiquitin ligase RBR family
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR012337 Ribonuclease H-like superfamily
IPR002867 IBR domain
IPR002156 Ribonuclease H domain
IPR036397 Ribonuclease H superfamily
IPR044730 Ribonuclease H-like domain, plant type
Mapman id Description
19.2.2.1.4.4.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA)