Gene: Lalb_Chr11g0070321

General Information

Structural Information

  • Species Lupinus albus
  • Gene Identifier Lalb_Chr11g0070321
  • Transcript Identifier Lalb_Chr11g0070321
  • Gene Type Coding gene
  • Location Lalb_Chr11 : 6924723-6938576 : positive

Gene Family Information

  • ID HOM05D001141
  • #Genes/#Species 542/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lalb_Chr11g0070321.v1
  • pacid 44565501
  • uniprot A0A6A4PS15

Descriptions

  • Description PTHR10625:SF109 - HISTONE DEACETYLASE 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT5G35600
GO:0010431
ISO
PLAZA Integrative Orthologyseed maturation AT5G63110
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT5G35600
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT5G63110
GO:0016441
ISO
PLAZA Integrative Orthologyposttranscriptional gene silencing AT5G63110
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT5G63110
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G63110
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G63110
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G63110
GO:0070932
IEA
GOA Databasehistone H3 deacetylation
GO:0016458
ISO
PLAZA Integrative Orthologygene silencing AT5G63110
GO:0016575
IEA
GOA Databasehistone deacetylation
GO:0016575
IEA
InterProhistone deacetylation
GO:0006325
IEA
GOA Databasechromatin organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G63110
GO:0004407
IEA
GOA Databasehistone deacetylase activity
GO:0004407
IEA
InterProhistone deacetylase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0032041
IEA
GOA DatabaseNAD-dependent histone deacetylase activity (H3-K14 specific)

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G63110
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023696 Ureohydrolase domain superfamily
IPR003084 Histone deacetylase
IPR023801 Histone deacetylase domain
IPR000286 Histone deacetylase family
IPR037138 Histone deacetylase domain superfamily
Mapman id Description
12.3.2.1.1.2.1 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.deacetylase component HDA19
12.3.2.1.1.3 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.histone deacetylase (HDA8)