Gene: Haze_23930

General Information

Structural Information

Species Corylus avellana
Gene Identifier Haze_23930
Transcript Identifier Haze_23930-RA
Gene Type Coding gene
Location 6 : 17473362-17476853 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000327
#Genes/#Species 1418/97
Phylogenetic origin

ID ORTHO05D000218
#Genes/#Species 1364/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Haze_23930-RA

Descriptions

Short descriptions
Ortholog descriptions

Description Similar to At4g01020: ATP-dependent RNA helicase DEAH11, chloroplastic (Arabidopsis thaliana OX=3702)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016567	IEA	InterPro	protein ubiquitination

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004842	IEA	InterPro	ubiquitin-protein transferase activity
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0004523	IEA	InterPro	RNA-DNA hybrid ribonuclease activity
GO:0061630	ISO	PLAZA Integrative Orthology	ubiquitin protein ligase activity	AT3G43750
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G43750

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT3G43750

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002867	IBR domain
IPR031127	E3 ubiquitin ligase RBR family
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR002156	Ribonuclease H domain
IPR036397	Ribonuclease H superfamily

Mapman id	Description
19.2.2.1.4.4.4	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA)