Gene: Haze_20084
General Information
Structural Information
- Species Corylus avellana
- Gene Identifier Haze_20084
- Transcript Identifier Haze_20084-RA
- Gene Type Coding gene
- Location 10 : 7464450-7469813 : positive
Gene Family Information
- ID HOM05D000861
- #Genes/#Species 694/100
- Phylogenetic origin
- ID ORTHO05D001925
- #Genes/#Species 336/91
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Haze_20084-RA
Descriptions
- Description Similar to UBA2A: UBP1-associated protein 2A (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | InterPro | translation | |
| GO:0009738 | ISO | PLAZA Integrative Orthology | abscisic acid-activated signaling pathway | AT3G56860 |
| GO:0008219 | ISO | PLAZA Integrative Orthology | cell death | AT3G56860 |
| GO:0009693 | ISO | PLAZA Integrative Orthology | ethylene biosynthetic process | AT3G56860 |
| GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT3G56860 |
| GO:0006952 | ISO | PLAZA Integrative Orthology | defense response | AT3G56860 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G56860 |
| GO:0035925 | ISO | PLAZA Integrative Orthology | mRNA 3'-UTR AU-rich region binding | AT3G56860 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G56860 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015935 | IEA | InterPro | small ribosomal subunit | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G56860 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G56860 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR036823 | Ribosomal protein S7 domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR005716 | Ribosomal protein S5/S7, eukaryotic/archaeal |
| IPR000504 | RNA recognition motif domain |
| IPR023798 | Ribosomal protein S7 domain |
| Mapman id | Description |
|---|---|
| 17.1.3.1.6 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS5 |