Gene: Haze_14386
General Information
Structural Information
- Species Corylus avellana
- Gene Identifier Haze_14386
- Transcript Identifier Haze_14386-RA
- Gene Type Coding gene
- Location 5 : 30350314-30359173 : negative
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000028
- #Genes/#Species 3637/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Haze_14386-RA
Descriptions
- Description Similar to MADS2: Agamous-like MADS-box protein MADS2 (Vitis vinifera OX=29760)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0016117 | ISO | PLAZA Integrative Orthology | carotenoid biosynthetic process | Solyc05g012020.4 |
| GO:0009836 | ISO | PLAZA Integrative Orthology | fruit ripening, climacteric | Solyc05g012020.4 |
| GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | AT5G15800 |
| GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT3G02310 |
| GO:0045944 | ISO | PLAZA Homology (enrichment) | positive regulation of transcription by RNA polymerase II | HOM05D000042 |
| GO:0010364 | ISO | PLAZA Integrative Orthology | regulation of ethylene biosynthetic process | Solyc05g012020.4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | ISO | PLAZA Homology (enrichment) | DNA binding | HOM05D000042 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G02310 |
| GO:0000977 | ISO | PLAZA Homology (enrichment) | RNA polymerase II transcription regulatory region sequence-specific DNA binding | HOM05D000042 |
| GO:0046983 | ISO | PLAZA Homology (enrichment) | protein dimerization activity | HOM05D000042 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002487 | Transcription factor, K-box |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |