Gene: HPP92_025464

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_025464
  • Transcript Identifier Vpl14Ag25464.1
  • Gene Type Coding gene
  • Location CM028163.1 : 12597986-12605992 : positive

Gene Family Information

  • ID HOM05D001458
  • #Genes/#Species 433/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl14Ag25464.1
  • pid KAG0452800.1

Descriptions

  • Description DNA topoisomerase 6 subunit A ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042138
IEA
InterPromeiotic DNA double-strand break formation
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT1G63990
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT1G63990
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G63990
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT1G63990
GO:0048437
ISO
PLAZA Integrative Orthologyfloral organ development AT1G63990
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT1G63990
GO:0006259
ISO
PLAZA Homology (enrichment)DNA metabolic process HOM05D001458

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003918
IEA
InterProDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D001458
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G63990
GO:0003824
ISO
PLAZA Homology (enrichment)catalytic activity HOM05D001458

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005694
IEA
InterProchromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034136 Topoisomerase 6 subunit A/Spo11, TOPRIM domain
IPR036078 Spo11/DNA topoisomerase VI subunit A superfamily
IPR002815 Spo11/DNA topoisomerase VI subunit A
Mapman id Description
35.1 not assigned.annotated