Gene: HPP92_024748
General Information
Structural Information
- Species Vanilla planifolia
- Gene Identifier HPP92_024748
- Transcript Identifier Vpl13Ag24748.1
- Gene Type Coding gene
- Location CM028162.1 : 19945826-19957067 : negative
Gene Family Information
- ID HOM05D001420
- #Genes/#Species 442/99
- Phylogenetic origin
- ID ORTHO05D002488
- #Genes/#Species 284/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Vpl13Ag24748.1
- pid KAG0455456.1
Descriptions
- Description Ribonucleoside-diphosphate reductase small chain ***
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009263 | IEA | InterPro | deoxyribonucleotide biosynthetic process | |
| GO:0006508 | IEA | InterPro | proteolysis | |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT3G23580 |
| GO:0007275 | ISO | PLAZA Integrative Orthology | multicellular organism development | AT3G23580 |
| GO:0006260 | ISO | PLAZA Integrative Orthology | DNA replication | AT3G27060 |
| GO:0009259 | ISO | PLAZA Integrative Orthology | ribonucleotide metabolic process | AT3G23580 |
| GO:0051726 | ISO | PLAZA Integrative Orthology | regulation of cell cycle | AT3G23580 |
| GO:0012501 | ISO | PLAZA Integrative Orthology | programmed cell death | AT3G27060 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008236 | IEA | InterPro | serine-type peptidase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0004748 | ISO | PLAZA Integrative Orthology | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | AT3G23580 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G23580 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR033909 | Ribonucleotide reductase small subunit |
| IPR005151 | Tail specific protease |
| IPR012348 | Ribonucleotide reductase-like |
| IPR000358 | Ribonucleotide reductase small subunit family |
| IPR036034 | PDZ superfamily |
| IPR041489 | PDZ domain 6 |
| IPR001478 | PDZ domain |
| IPR009078 | Ferritin-like superfamily |
| IPR029045 | ClpP/crotonase-like domain superfamily |
| Mapman id | Description |
|---|---|
| 6.3.1.1.2 | Nucleotide metabolism.deoxynucleotides.biosynthesis.ribonucleoside-diphosphate reductase heterodimer.small subunit |