Gene: HPP92_022499

General Information

Structural Information

Species Vanilla planifolia
Gene Identifier HPP92_022499
Transcript Identifier Vpl12Ag22499.1
Gene Type Coding gene
Location CM028161.1 : 16196822-16213564 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000285
#Genes/#Species 1537/100
Phylogenetic origin

ID ORTHO05D000241
#Genes/#Species 1292/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Vpl12Ag22499.1
pid KAG0457342.1

Descriptions

Short descriptions
Ortholog descriptions

Description RNA-binding protein-like *-*

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:2000070	ISO	PLAZA Integrative Orthology	regulation of response to water deprivation	AT4G14300
GO:1901000	ISO	PLAZA Integrative Orthology	regulation of response to salt stress	AT4G14300
GO:0010228	ISO	PLAZA Integrative Orthology	vegetative to reproductive phase transition of meristem	AT4G14300

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003723	IEA	InterPro	RNA binding
GO:0003727	ISO	PLAZA Integrative Orthology	single-stranded RNA binding	AT1G58470
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT4G14300

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT4G14300
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT4G14300

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR035979	RNA-binding domain superfamily
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR034131	DAZ-associated protein 1, RNA recognition motif 2

Mapman id	Description
35.1	not assigned.annotated