Gene: HPP92_020084

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_020084
  • Transcript Identifier Vpl10Ag20084.1
  • Gene Type Coding gene
  • Location CM028159.1 : 15967405-15977234 : negative

Gene Family Information

  • ID HOM05D001612
  • #Genes/#Species 400/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl10Ag20084.1
  • pid KAG0464015.1

Descriptions

  • Description Cysteine--tRNA ligase ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006423
IEA
InterProcysteinyl-tRNA aminoacylation
GO:0006417
ISO
PLAZA Integrative Orthologyregulation of translation Zm00001eb063470
GO:0006418
ISO
PLAZA Homology (enrichment)tRNA aminoacylation for protein translation HOM05D001612
GO:0010197
ISO
PLAZA Integrative Orthologypolar nucleus fusion AT2G31170
GO:0042407
ISO
PLAZA Integrative Orthologycristae formation AT2G31170
GO:0043067
ISO
PLAZA Integrative Orthologyregulation of programmed cell death AT2G31170
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G38830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004817
IEA
InterProcysteine-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0000166
ISO
PLAZA Homology (enrichment)nucleotide binding HOM05D001612
GO:0004812
ISO
PLAZA Homology (enrichment)aminoacyl-tRNA ligase activity HOM05D001612

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT2G31170
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast Zm00001eb063470
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT2G31170
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G38830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase
IPR032678 tRNA synthetases class I, catalytic domain
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR015803 Cysteine-tRNA ligase
Mapman id Description
17.2.5 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase