Gene: Gohir.A12G131500
General Information
Structural Information
- Species Gossypium hirsutum
- Gene Identifier Gohir.A12G131500
- Transcript Identifier Gohir.A12G131500.1
- Gene Type Coding gene
- Location A12 : 85920429-85923871 : negative
Gene Family Information
- ID HOM05D002199
- #Genes/#Species 305/99
- Phylogenetic origin
- ID ORTHO05D007829
- #Genes/#Species 126/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Gohir.A12G131500.v2.1
- pacid 42439701
Descriptions
- Description PF01119//PF13589 - DNA mismatch repair protein, C-terminal domain (DNA_mis_repair) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006298 | IEA | InterPro | mismatch repair | |
| GO:0000956 | ISO | PLAZA Homology (enrichment) | nuclear-transcribed mRNA catabolic process | HOM05D002199 |
| GO:0006396 | ISO | PLAZA Homology (enrichment) | RNA processing | HOM05D002199 |
| GO:0000398 | ISO | PLAZA Homology (enrichment) | mRNA splicing, via spliceosome | HOM05D002199 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0030983 | IEA | InterPro | mismatched DNA binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032300 | IEA | InterPro | mismatch repair complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013507 | DNA mismatch repair protein, S5 domain 2-like |
| IPR036890 | Histidine kinase/HSP90-like ATPase superfamily |
| IPR038973 | DNA mismatch repair protein MutL/Mlh/Pms |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR002099 | DNA mismatch repair protein family, N-terminal |
| Mapman id | Description |
|---|---|
| 14.7.2.2 | DNA damage response.mismatch repair (MMR).MLH1-PMS1 heterodimer.component PMS1 |