Gene: Gohir.A12G043000

General Information

Structural Information

  • Species Gossypium hirsutum
  • Gene Identifier Gohir.A12G043000
  • Transcript Identifier Gohir.A12G043000.2
  • Gene Type Coding gene
  • Location A12 : 7869589-7873058 : positive

Gene Family Information

  • ID HOM05D003708
  • #Genes/#Species 185/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Gohir.A12G043000.v2.1
  • pacid 42438692

Descriptions

  • Description PF01168//PF02784 - Alanine racemase, N-terminal domain (Ala_racemase_N) // Pyridoxal-dependent decarboxylase, pyridoxal binding domain (Orn_Arg_deC_N)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009089
ISO
PLAZA Homology (enrichment)lysine biosynthetic process via diaminopimelate HOM05D003708

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0008836
ISO
PLAZA Integrative Orthologydiaminopimelate decarboxylase activity AT3G14390

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G14390
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G11880
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G11880

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal
IPR029066 PLP-binding barrel
IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal
IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal
Mapman id Description
4.1.2.2.3.5 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.diaminopimelate decarboxylase