Gene: FvH4_6g10820
General Information
Structural Information
- Species Fragaria vesca
- Gene Identifier FvH4_6g10820
- Transcript Identifier FvH4_6g10820.t1
- Gene Type Coding gene
- Location Fvb6 : 6495682-6496647 : positive
Gene Family Information
- ID HOM05D003408
- #Genes/#Species 201/99
- Phylogenetic origin
- ID ORTHO05D003949
- #Genes/#Species 197/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id FvH4_6g10820.v4.0.a2
- pacid 50650837
Descriptions
- Description 4.1.2.8 - Indole-3-glycerol-phosphate lyase / TSA
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006568 | IEA | InterPro | tryptophan metabolic process | |
| GO:0000162 | ISO | PLAZA Integrative Orthology | tryptophan biosynthetic process | AT4G02610 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004834 | IEA | InterPro | tryptophan synthase activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0033984 | ISO | PLAZA Integrative Orthology | indole-3-glycerol-phosphate lyase activity | AT4G02610 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G02610 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G02610 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 4.1.5.3.5.1 | Amino acid metabolism.biosynthesis.shikimate family.tryptophan.tryptophan synthase heterodimer.subunit alpha |