Gene: FAN27G0824

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN27G0824
  • Transcript Identifier FAN27G0824.1
  • Gene Type Coding gene
  • Location Fvb2-1 : 2853114-2864109 : positive

Gene Family Information

  • ID HOM05D000983
  • #Genes/#Species 613/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb2-1-snap-gene-28.37.v1.0.a1
  • pacid 50515054

Descriptions

  • Description PF03798//PF07821 - TLC domain (TRAM_LAG1_CLN8) // Alpha-amylase C-terminal beta-sheet domain (Alpha-amyl_C2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0005987
ISO
PLAZA Integrative Orthologysucrose catabolic process Os08g0473900
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin AT4G25000
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT4G25000
GO:0005983
ISO
PLAZA Integrative Orthologystarch catabolic process Os08g0473900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004556
IEA
InterProalpha-amylase activity
GO:0005509
IEA
InterProcalcium ion binding
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT4G25000
GO:0005576
ISO
PLAZA Integrative Orthologyextracellular region AT4G25000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006634 TRAM/LAG1/CLN8 homology domain
IPR012850 Alpha-amylase, C-terminal beta-sheet
IPR017853 Glycoside hydrolase superfamily
IPR013780 Glycosyl hydrolase, all-beta
IPR006047 Glycosyl hydrolase, family 13, catalytic domain
Mapman id Description
3.2.3.3.1.1 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.alpha amylase
5.4.6 Lipid metabolism.sphingolipid biosynthesis.ceramide synthase (LOH)