Gene: FAN11G2918

General Information

Structural Information

Species Fragaria x ananassa
Gene Identifier FAN11G2918
Transcript Identifier FAN11G2918.1
Gene Type Coding gene
Location Fvb3-4 : 6117124-6131028 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000413
#Genes/#Species 967/94
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

id maker-Fvb3-4-snap-gene-61.34.v1.0.a1
pacid 50539788

Descriptions

Short descriptions
Ortholog descriptions

Description PF01535//PF03514//PF13041//PF14432 - PPR repeat (PPR) // GRAS domain family (GRAS) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0080183	ISO	PLAZA Integrative Orthology	response to photooxidative stress	AT1G07530
GO:0045893	ISO	PLAZA Integrative Orthology	positive regulation of transcription, DNA-templated	AT1G07530
GO:0006355	ISO	PLAZA Integrative Orthology	regulation of transcription, DNA-templated	AT2G29060
GO:0009410	ISO	PLAZA Integrative Orthology	response to xenobiotic stimulus	AT1G07530

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT1G07530

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G07530
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G07530

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR005202	Transcription factor GRAS
IPR002885	Pentatricopeptide repeat
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR032867	DYW domain

Mapman id	Description
15.5.12	RNA biosynthesis.transcriptional regulation.transcription factor (GRAS)
16.11.3.3.4.59	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (DOT4)