Gene: AT1G07530
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G07530
- Transcript Identifier AT1G07530.1
- Gene Type Coding gene
- Location Chr1 : 2313828-2316137 : negative
Gene Family Information
- ID HOM05D000511
- #Genes/#Species 1053/94
- Phylogenetic origin
- ID ORTHO05D000413
- #Genes/#Species 967/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G07530.1
- symbol SCL14
- Alias ATGRAS2,ARABIDOPSIS THALIANA GRAS (GAI, RGA, SCR) 2,GRAS2,GRAS (GAI, RGA, SCR) 2
- uniprot Q9XE58
Descriptions
- Description SCARECROW-like 14
- Computational description SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IBA TAS | Gene Ontology | regulation of transcription, DNA-templated | 1 2 |
| GO:0009410 | IMP | Gene Ontology | response to xenobiotic stimulus | 3 |
| GO:0045893 | IMP | Gene Ontology | positive regulation of transcription, DNA-templated | 3 |
| GO:0080183 | IMP | Gene Ontology | response to photooxidative stress | 4 |
| GO:0010200 | IBA | Gene Ontology | response to chitin | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISS, IBA | Gene Ontology | DNA-binding transcription factor activity | 1 2 |
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 5 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 6 |
| GO:0043565 | IBA | Gene Ontology | sequence-specific DNA binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 2 3 |
| GO:0005829 | IDA | Gene Ontology | cytosol | 3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005202 | Transcription factor GRAS |
| Mapman id | Description |
|---|---|
| 15.5.12 | RNA biosynthesis.transcriptional regulation.transcription factor (GRAS) |