Gene: FAN11G2642

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN11G2642
  • Transcript Identifier FAN11G2642.1
  • Gene Type Coding gene
  • Location Fvb3-4 : 23590001-23606332 : negative

Gene Family Information

  • ID HOM05D000128
  • #Genes/#Species 2706/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb3-4-snap-gene-236.87.v1.0.a1
  • pacid 50538606

Descriptions

  • Description 1.3.3.8 - Tetrahydroberberine oxidase / THB oxidase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT5G44380
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT4G20830
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G34790
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G44440
GO:0010197
ISO
PLAZA Integrative Orthologypolar nucleus fusion AT2G34790

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045551
ISO
PLAZA Integrative Orthologycinnamyl-alcohol dehydrogenase activity AT2G34790
GO:0050268
ISO
PLAZA Integrative Orthologyconiferyl-alcohol dehydrogenase activity AT2G34790
GO:0050660
IEA
InterProflavin adenine dinucleotide binding
GO:0016899
ISO
PLAZA Integrative Orthologyoxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor AT4G20830
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G20830
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT4G20830
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G20830
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT2G34790
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G34790
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G20830
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G20830
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT5G44410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036318 FAD-binding, type PCMH-like superfamily
IPR016169 FAD-binding, type PCMH, subdomain 2
IPR012951 Berberine/berberine-like
IPR006094 FAD linked oxidase, N-terminal
IPR016167 FAD-binding, type PCMH, subdomain 1
Mapman id Description
50.1.1 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor