Gene: FAN10G3957
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN10G3957
- Transcript Identifier FAN10G3957.1
- Gene Type Coding gene
- Location Fvb7-1 : 3456451-3457522 : negative
Gene Family Information
- ID HOM05D005089
- #Genes/#Species 147/93
- Phylogenetic origin
- ID ORTHO05D006232
- #Genes/#Species 146/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb7-1-augustus-gene-34.27.v1.0.a1
- pacid 50488172
Descriptions
- Description PTHR15588//PTHR15588:SF9 - LSM1 // U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome | |
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | AT1G65700 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G65700 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005688 | IEA | InterPro | U6 snRNP | |
| GO:0046540 | IEA | InterPro | U4/U6 x U5 tri-snRNP complex | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G65700 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.3.8 | RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm8 |