Gene: FAN05G3440
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN05G3440
- Transcript Identifier FAN05G3440.1
- Gene Type Coding gene
- Location Fvb6-3 : 22623008-22625184 : negative
Gene Family Information
- ID HOM05D002311
- #Genes/#Species 293/100
- Phylogenetic origin
- ID ORTHO05D006529
- #Genes/#Species 141/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb6-3-augustus-gene-226.35.v1.0.a1
- pacid 50501684
Descriptions
- Description PF00009//PF03144 - Elongation factor Tu GTP binding domain (GTP_EFTU) // Elongation factor Tu domain 2 (GTP_EFTU_D2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT5G13650 |
| GO:0010468 | ISO | PLAZA Integrative Orthology | regulation of gene expression | AT5G13650 |
| GO:0006364 | ISO | PLAZA Integrative Orthology | rRNA processing | AT5G13650 |
| GO:0000302 | ISO | PLAZA Integrative Orthology | response to reactive oxygen species | AT5G13650 |
| GO:0050821 | ISO | PLAZA Integrative Orthology | protein stabilization | AT5G13650 |
| GO:0031425 | ISO | PLAZA Integrative Orthology | chloroplast RNA processing | AT5G13650 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G13650 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G13650 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004161 | Translation elongation factor EFTu-like, domain 2 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR000795 | Translational (tr)-type GTP-binding domain |
| IPR005225 | Small GTP-binding protein domain |
| IPR009000 | Translation protein, beta-barrel domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |