Gene: EL10Ac2g02439

General Information

Structural Information

  • Species Beta vulgaris
  • Gene Identifier EL10Ac2g02439
  • Transcript Identifier EL10Ac2g02439.1
  • Gene Type Coding gene
  • Location Chr2_EL10_PGA_scaffold6 : 679720-692081 : positive

Gene Family Information

  • ID HOM05D001141
  • #Genes/#Species 542/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id EL10Ac2g02439.EL10_1.0
  • pacid 43407615

Descriptions

  • Description PTHR10625//PTHR10625:SF124 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 9
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016575
IEA
InterProhistone deacetylation
GO:0010187
ISO
PLAZA Integrative Orthologynegative regulation of seed germination AT3G44680
GO:1900055
ISO
PLAZA Integrative Orthologyregulation of leaf senescence AT3G44680
GO:1990619
ISO
PLAZA Integrative Orthologyhistone H3-K9 deacetylation AT3G44680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004407
IEA
InterProhistone deacetylase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G44680
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT3G44680

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G44680
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G44680
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G44680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR003084 Histone deacetylase
IPR000286 Histone deacetylase family
IPR023696 Ureohydrolase domain superfamily
IPR023801 Histone deacetylase domain
IPR037138 Histone deacetylase domain superfamily
Mapman id Description
12.3.2.1.1.3 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.histone deacetylase (HDA8)