Gene: ECA233G3883

General Information

Structural Information

Species Erigeron canadensis
Gene Identifier ECA233G3883
Transcript Identifier ECA233G3883.1
Gene Type Coding gene
Location Conyza_canadensis_scaffold:1 : 53093651-53104427 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000327
#Genes/#Species 1418/97
Phylogenetic origin

ID ORTHO05D000218
#Genes/#Species 1364/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

name g5460
Alias g5460.t2

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016567	IEA	InterPro	protein ubiquitination

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005515	IEA	InterPro	protein binding
GO:0046872	IEA	InterPro	metal ion binding
GO:0004842	IEA	InterPro	ubiquitin-protein transferase activity
GO:0004523	IEA	InterPro	RNA-DNA hybrid ribonuclease activity

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036397	Ribonuclease H superfamily
IPR002885	Pentatricopeptide repeat
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR018957	Zinc finger, C3HC4 RING-type
IPR001841	Zinc finger, RING-type
IPR002867	IBR domain
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR012337	Ribonuclease H-like superfamily
IPR031127	E3 ubiquitin ligase RBR family
IPR002156	Ribonuclease H domain

Mapman id	Description
16.11.4.2.1.12	RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.splicing factor (MISF74)
19.2.2.1.4.4.4	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA)