Gene: DCAR_006156
General Information
Structural Information
- Species Daucus carota
- Gene Identifier DCAR_006156
- Transcript Identifier DCAR_006156
- Gene Type Coding gene
- Location DCARv2_Chr2 : 22556062-22561032 : negative
Gene Family Information
- ID HOM05D001141
- #Genes/#Species 542/100
- Phylogenetic origin
- ID ORTHO05D001088
- #Genes/#Species 493/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 36065034
- id DCAR_006156.v1.0
- uniprot A0A166DJC5
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1990619 | ISO | PLAZA Integrative Orthology | histone H3-K9 deacetylation | AT3G44680 |
| GO:1900055 | ISO | PLAZA Integrative Orthology | regulation of leaf senescence | AT3G44680 |
| GO:0010187 | ISO | PLAZA Integrative Orthology | negative regulation of seed germination | AT3G44680 |
| GO:0016575 | IEA | GOA Database | histone deacetylation | |
| GO:0016575 | IEA | InterPro | histone deacetylation | |
| GO:0006325 | IEA | GOA Database | chromatin organization | |
| GO:0070932 | IEA | GOA Database | histone H3 deacetylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT3G44680 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G44680 |
| GO:0004407 | IEA | GOA Database | histone deacetylase activity | |
| GO:0004407 | IEA | InterPro | histone deacetylase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0032041 | IEA | GOA Database | NAD-dependent histone deacetylase activity (H3-K14 specific) |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G44680 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G44680 |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.2.1.1.1.1 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.HDA9-PWR deacetylation complex.deacetylase component HDA9 |
| 12.3.2.1.1.3 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.histone deacetylase (HDA8) |