Gene: CsaV3_6G044660
General Information
Structural Information
- Species Cucumis sativus L.
- Gene Identifier CsaV3_6G044660
- Transcript Identifier CsaV3_6G044660.1
- Gene Type Coding gene
- Location chr6 : 26441149-26442315 : positive
Gene Family Information
- ID HOM05D002845
- #Genes/#Species 243/98
- Phylogenetic origin
- ID ORTHO05D003180
- #Genes/#Species 239/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CsaV3_6G044660.1
Descriptions
- Description protein RMD5 homolog A
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043161 | IEA | InterPro | proteasome-mediated ubiquitin-dependent protein catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G37880 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR024964 | CTLH/CRA C-terminal to LisH motif domain |
| IPR006594 | LIS1 homology motif |
| IPR013144 | CRA domain |
| IPR027370 | RING-type zinc-finger, LisH dimerisation motif |
| IPR037683 | Rmd5, degenerated RING (dRING) finger |
| IPR045098 | Fyv10 family |
| IPR001841 | Zinc finger, RING-type |
| IPR006595 | CTLH, C-terminal LisH motif |
| Mapman id | Description |
|---|---|
| 19.2.1.3.1.2 | Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.ubiquitin ligase component GID2 |