Gene: Cre16.g670300

General Information

Structural Information

  • Species Chlamydomonas reinhardtii
  • Gene Identifier Cre16.g670300
  • Transcript Identifier Cre16.g670300.t2.1
  • Gene Type Coding gene
  • Location chromosome_16 : 4021999-4027701 : negative

Gene Family Information

  • ID HOM05D002279
  • #Genes/#Species 296/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Cre16.g670300.v5.5
  • pacid 30778244
  • alias g16223.t1
  • geneName PRP39
  • uniprot A8JB59

Descriptions

  • Description U1 snRNP protein involved in splicing, contains multiple tetratricopeptide repeats; homologue of S. cerevisiae Prp39
  • Description Nuclear pre-mRNA splicing factor and U1 snRNP Component
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT1G04080

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR003107 HAT (Half-A-TPR) repeat
Mapman id Description
16.2.1.1.5.3 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA-processing protein (PRP39)