Gene: Cre03.g146507
General Information
Structural Information
- Species Chlamydomonas reinhardtii
- Gene Identifier Cre03.g146507
- Transcript Identifier Cre03.g146507.t1.1
- Gene Type Coding gene
- Location chromosome_3 : 840920-844639 : negative
Gene Family Information
- ID HOM05D003051
- #Genes/#Species 225/98
- Phylogenetic origin
- ID ORTHO05D003932
- #Genes/#Species 198/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Cre03.g146507.v5.5
- pacid 30787127
- alias g2990.t1
- geneName SPT2
- uniprot A8J2W1
Descriptions
- Description Serine palmitoyltransferase
- Description Similar to serine palmitoyltransferase, first step in sphingolipid biosynthesis
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009058 | IEA | GOA Database | biosynthetic process | |
| GO:0009058 | IEA | InterPro | biosynthetic process | |
| GO:0009825 | ISO | PLAZA Integrative Orthology | multidimensional cell growth | AT4G36480 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT4G36480 |
| GO:0043067 | ISO | PLAZA Integrative Orthology | regulation of programmed cell death | AT4G36480 |
| GO:0030148 | ISO | PLAZA Integrative Orthology | sphingolipid biosynthetic process | AT4G36480 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0030170 | IEA | GOA Database | pyridoxal phosphate binding | |
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G36480 |
| GO:0004758 | ISO | PLAZA Integrative Orthology | serine C-palmitoyltransferase activity | AT4G36480 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT4G36480 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.4.1.1 | Lipid metabolism.sphingolipid biosynthesis.serine C-palmitoyltransferase complex.catalytic subunit LCB1 |