Gene: Cre01.g002200

General Information

Structural Information

  • Species Chlamydomonas reinhardtii
  • Gene Identifier Cre01.g002200
  • Transcript Identifier Cre01.g002200.t1.1
  • Gene Type Coding gene
  • Location chromosome_1 : 348094-349755 : positive

Gene Family Information

  • ID HOM05D003818
  • #Genes/#Species 181/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Cre01.g002200.v5.5
  • pacid 30789017
  • alias g50.t1
  • geneName RPB6
  • uniprot A8JD59

Descriptions

  • Description Putative DNA-directed RNA polymerase subunit, sequence similarity to yeast RNB6 (13-15 kDa)
  • Description Subunit of DNA-directed RNA polymerase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G51940

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005665
IEA
InterProRNA polymerase II, core complex
GO:0000419
ISO
PLAZA Integrative OrthologyRNA polymerase V complex AT5G51940
GO:0000418
ISO
PLAZA Integrative OrthologyRNA polymerase IV complex AT5G51940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028363 DNA-directed RNA polymerase, subunit RPB6
IPR006110 RNA polymerase, subunit omega/K/RPB6
IPR036161 RPB6/omega subunit-like superfamily
IPR012293 RNA polymerase subunit, RPB6/omega
IPR006111 Archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit
Mapman id Description
15.1.6.4 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 6