Gene: ClCG08G010310
General Information
Structural Information
- Species Citrullus lanatus
- Gene Identifier ClCG08G010310
- Transcript Identifier ClCG08G010310.1
- Gene Type Coding gene
- Location CG_Chr08 : 23063800-23072397 : positive
Gene Family Information
- ID HOM05D006135
- #Genes/#Species 129/92
- Phylogenetic origin
- ID ORTHO05D008017
- #Genes/#Species 124/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid ClCG08G010310.1
- name augustus_masked-CGscf_0017-processed-gene-6.636
- name augustus_masked-CGscf_0017-processed-gene-6.636-mRNA-1
Descriptions
- Description COBW domain-containing protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010449 | ISO | PLAZA Integrative Orthology | root meristem growth | AT1G13870 |
| GO:0048366 | ISO | PLAZA Integrative Orthology | leaf development | AT1G13870 |
| GO:0080178 | ISO | PLAZA Integrative Orthology | 5-carbamoylmethyl uridine residue modification | AT1G13870 |
| GO:0002098 | ISO | PLAZA Integrative Orthology | tRNA wobble uridine modification | AT1G13870 |
| GO:0009933 | ISO | PLAZA Integrative Orthology | meristem structural organization | AT1G13870 |
| GO:0006400 | ISO | PLAZA Integrative Orthology | tRNA modification | AT1G13870 |
| GO:0006357 | ISO | PLAZA Integrative Orthology | regulation of transcription by RNA polymerase II | AT1G13870 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005516 | ISO | PLAZA Integrative Orthology | calmodulin binding | AT1G13870 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033588 | ISO | PLAZA Integrative Orthology | elongator holoenzyme complex | AT1G13870 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003495 | CobW/HypB/UreG, nucleotide-binding domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR013641 | Protein KTI12/L-seryl-tRNA(Sec) kinase |
| IPR011629 | Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal |
| IPR036627 | CobW-like, C-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 15.3.5.2.7 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.ELONGATOR transcription elongation complex.associated regulatory component DRL1 |