Gene: ClCG03G012340

General Information

Structural Information

  • Species Citrullus lanatus
  • Gene Identifier ClCG03G012340
  • Transcript Identifier ClCG03G012340.1
  • Gene Type Coding gene
  • Location CG_Chr03 : 25077483-25080758 : negative

Gene Family Information

  • ID HOM05D001283
  • #Genes/#Species 488/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid ClCG03G012340.1
  • name augustus_masked-CGscf_0012-processed-gene-1.298
  • name augustus_masked-CGscf_0012-processed-gene-1.298-mRNA-1

Descriptions

  • Description Arginine/serine-rich splicing factor
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT5G18810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G55310
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G18810
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G13570

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G18810
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G18810
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G13570
GO:0035061
ISO
PLAZA Integrative Orthologyinterchromatin granule AT1G55310
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G55310
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G55310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.2.6.2 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SCL28/30/33)