Gene: ClCG00G001020

General Information

Structural Information

  • Species Citrullus lanatus
  • Gene Identifier ClCG00G001020
  • Transcript Identifier ClCG00G001020.1
  • Gene Type Coding gene
  • Location CG_Chr00 : 3619655-3632003 : negative

Gene Family Information

  • ID HOM05D000693
  • #Genes/#Species 826/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid ClCG00G001020.1
  • name maker-CGscf_0114-snap-gene-0.45
  • name maker-CGscf_0114-snap-gene-0.45-mRNA-1

Descriptions

  • Description Nucleoredoxin, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT1G60420
GO:0010183
ISO
PLAZA Integrative Orthologypollen tube guidance AT1G60420
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G60420
GO:0080092
ISO
PLAZA Integrative Orthologyregulation of pollen tube growth AT1G60420

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding Zm00001eb019530
GO:0004791
ISO
PLAZA Integrative Orthologythioredoxin-disulfide reductase activity Zm00001eb019530

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000439
IEA
InterProtranscription factor TFIIH core complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Zm00001eb019530
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G60420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035935 TFB5-like superfamily
IPR036249 Thioredoxin-like superfamily
IPR009400 TFIIH subunit TTDA/Tfb5
IPR012336 Thioredoxin-like fold
IPR004146 DC1
Mapman id Description
10.4.3.8 Redox homeostasis.thiol-based redox regulation.thioredoxin activities.nucleoredoxin
14.6.3.2.7 DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.core module.subunit TFB5
15.3.3.5.1.7 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.core module.component TFB5