Gene: CiPaw.03G048400

General Information

Structural Information

  • Species Carya illinoinensis
  • Gene Identifier CiPaw.03G048400
  • Transcript Identifier CiPaw.03G048400.1
  • Gene Type Coding gene
  • Location Chr03 : 4554066-4556345 : positive

Gene Family Information

  • ID HOM05D006844
  • #Genes/#Species 118/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id CiPaw.03G048400.v1.1
  • pacid 45819122
  • locus Caril.03G041500

Descriptions

  • Description PTHR24015:SF641 - PENTATRICOPEPTIDE REPEAT REPEAT-CONTAINING PROTEIN
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly AT3G46610
GO:0006413
ISO
PLAZA Integrative Orthologytranslational initiation AT3G46610
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT3G46610
GO:0032544
ISO
PLAZA Integrative Orthologyplastid translation AT3G46610

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT3G46610
GO:0008494
ISO
PLAZA Integrative Orthologytranslation activator activity AT3G46610
GO:0043022
ISO
PLAZA Integrative Orthologyribosome binding AT3G46610
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G46610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G46610
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT3G46610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
1.1.1.3.20 Photosynthesis.photophosphorylation.photosystem II.assembly.psbJ/psbN-translation activator (LPE1)