Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 8.0e-295 1016.9 760 100.0
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 3.2e-227 792.3 763 74.2
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 1.3e-217 760.4 763 74.7
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 5.7e-200 701.8 521 77.4
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 2.6e-160 570.1 524 56.1
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 8.3e-159 565.1 754 59.4
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 2.9e-156 556.6 763 69.2
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 2.3e-153 547.0 765 71.4
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 2.3e-153 547.0 535 61.7
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 6.8e-153 545.4 765 71.8
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 4.4e-152 542.7 458 59.8
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 1.3e-151 541.2 765 71.6
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 2.9e-151 540.0 755 69.7
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 6.4e-151 538.9 542 63.3
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 8.3e-151 538.5 542 63.1
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 1.4e-150 537.7 760 70.9
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 7.8e-149 531.9 765 70.8
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 1.5e-147 527.7 770 69.1
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 2.5e-147 526.9 508 65.6
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 9.5e-147 525.0 762 69.7
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 1.2e-146 524.6 755 67.5
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 6.2e-146 522.3 523 65.6
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 6.2e-146 522.3 524 62.4
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 3.4e-144 516.5 526 62.0
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 9.8e-144 515.0 769 69.7
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 2.2e-143 513.8 764 67.4
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 2.2e-143 513.8 764 67.4
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 1.1e-142 511.5 527 62.4
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 1.3e-140 504.6 782 65.7
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 1.5e-139 501.1 817 64.3
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 3.3e-139 500.0 449 68.6
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 4.3e-139 499.6 779 64.8
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 3.6e-138 496.5 767 67.0
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 4.0e-137 493.0 765 68.5
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 3.4e-136 490.0 521 56.4
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 2.2e-135 487.3 754 68.4
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 3.2e-134 483.4 685 72.0
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 5.4e-134 482.6 524 59.0
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 1.6e-133 481.1 537 57.4
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 2.7e-133 480.3 762 62.9
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 3.0e-132 476.9 792 65.3
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 5.1e-132 476.1 772 44.2
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 5.1e-132 476.1 772 44.2
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 8.6e-132 475.3 765 62.4
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.5e-131 473.8 785 57.8
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 2.5e-131 473.8 661 70.8
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 4.3e-131 473.0 482 63.1
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 1.2e-130 471.5 525 59.6
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.8e-130 470.3 482 63.1
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 3.6e-130 469.9 671 63.5
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.4e-129 468.0 672 71.4
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 3.1e-129 466.8 677 70.2
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 5.2e-129 466.1 679 71.3
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 6.8e-129 465.7 518 56.4
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 2.0e-128 464.2 745 66.0
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.0e-128 464.2 482 60.2
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 9.9e-128 461.8 444 65.8
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 6.4e-127 459.1 523 57.7
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.4e-126 458.0 671 68.3
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 2.4e-126 457.2 558 53.9
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 4.1e-126 456.4 515 57.9
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 4.1e-126 456.4 519 57.6
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 1.0e-124 451.8 511 59.1
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 1.3e-124 451.4 556 84.5
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 1.3e-124 451.4 426 66.7
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 1.7e-124 451.1 452 64.2
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 8.6e-124 448.7 521 56.4
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.1e-123 448.4 362 72.4
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 1.9e-123 447.6 767 64.0
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 1.1e-121 441.8 518 51.5
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 2.4e-121 440.7 505 57.4
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 3.1e-121 440.3 678 64.5
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 4.0e-121 439.9 520 56.9
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 1.2e-120 438.3 459 61.0
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 2.6e-120 437.2 676 64.2
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 3.4e-120 436.8 536 56.7
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.4e-120 436.8 541 52.7
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 1.3e-119 434.9 689 59.9
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 2.4e-118 430.6 442 62.4
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 9.3e-118 428.7 500 56.0
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 2.1e-117 427.6 672 62.8
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 3.5e-117 426.8 458 61.4
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 8.7e-116 422.2 518 55.0
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 4.3e-115 419.9 541 54.3
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 1.6e-114 417.9 386 60.1
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 4.0e-113 413.3 362 68.2
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 4.5e-112 409.8 338 74.0
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 5.8e-112 409.5 357 70.3
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 2.7e-109 400.6 367 70.6
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 7.9e-109 399.1 365 70.7
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 7.9e-109 399.1 365 70.7
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 1.3e-108 398.3 367 70.3
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 1.3e-108 398.3 554 77.3
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 3.9e-108 396.7 541 78.7
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 8.1e-106 389.0 365 69.6
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 1.3e-103 381.7 330 70.3
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 1.7e-103 381.3 445 56.9
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 2.7e-101 374.0 436 58.3
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 6.7e-100 369.4 406 58.1
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.9e-99 367.9 436 58.9
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 3.7e-98 363.6 374 64.2
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 3.6e-77 293.9 368 45.4
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 2.2e-74 284.6 201 67.7
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 1.1e-65 255.8 536 34.9
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 1.0e-60 239.2 524 42.0
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.3e-60 238.0 203 58.6
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 1.1e-46 192.6 378 47.1
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 7.0e-41 173.3 365 38.6
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 1.4e-33 149.1 371 43.4
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 4.7e-29 134.0 215 61.4
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 4.6e-24 117.5 168 36.3
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 5.0e-23 114.0 142 44.4
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 6.8e-20 103.6 61 77.0
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 2.5e-14 85.1 58 67.2


User provided reference genes

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