Gene: Cfa012257
General Information
Structural Information
- Species Carpinus fangiana
- Gene Identifier Cfa012257
- Transcript Identifier Cfa012257.t1
- Gene Type Coding gene
- Location Cfa05 : 4636811-4642796 : positive
Gene Family Information
- ID HOM05D000032
- #Genes/#Species 5307/100
- Phylogenetic origin
- ID ORTHO05D003522
- #Genes/#Species 219/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Cfa012257.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009790 | ISO | PLAZA Integrative Orthology | embryo development | AT5G65900 |
GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc03g114370.4 |
GO:0048866 | ISO | PLAZA Integrative Orthology | stem cell fate specification | AT5G65900 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0003724 | IEA | InterPro | RNA helicase activity | |
GO:0003723 | ISO | PLAZA Integrative Orthology | RNA binding | AT5G65900 |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G65900 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G65900 |
GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT3G18600 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR011545 | DEAD/DEAH box helicase domain |
IPR001650 | Helicase, C-terminal |
IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR044773 | DDX18/Has1, DEAD-box helicase domain |
IPR025313 | Domain of unknown function DUF4217 |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |