Gene: Cfa008720
General Information
Structural Information
- Species Carpinus fangiana
- Gene Identifier Cfa008720
- Transcript Identifier Cfa008720.t1
- Gene Type Coding gene
- Location Cfa03 : 20493566-20501470 : positive
Gene Family Information
- ID HOM05D005264
- #Genes/#Species 144/96
- Phylogenetic origin
- ID ORTHO05D001742
- #Genes/#Species 361/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Cfa008720.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT1G50280 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G50280 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031463 | ISO | PLAZA Integrative Orthology | Cul3-RING ubiquitin ligase complex | AT1G50280 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000504 | RNA recognition motif domain |
| IPR001876 | Zinc finger, RanBP2-type |
| IPR011333 | SKP1/BTB/POZ domain superfamily |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR036443 | Zinc finger, RanBP2-type superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR027356 | NPH3 domain |
| IPR043454 | NPH3/RPT2-like family |
| Mapman id | Description |
|---|---|
| 15.3.4.2.10 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.component TAF15 |
| 19.2.2.8.2.2.5 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substate adaptor (BPH1) |