Gene: Cc11_g11720
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc11_g11720
- Transcript Identifier Cc11_g11720.1
- Gene Type Coding gene
- Location chr11 : 28945246-28951240 : negative
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000028
- #Genes/#Species 3637/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- UniProtKB P29383
- UniProtKB E9JPX5
- UniProtKB Q39685
- UniProtKB Q38694
- UniProtKB Q8S4L4
- UniProtKB Q8L5F3
- id GSCOCG00032409001
Descriptions
- Description MADS-box protein CMB1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
| GO:0016117 | ISO | PLAZA Integrative Orthology | carotenoid biosynthetic process | Solyc05g012020.4 |
| GO:0048441 | ISO | PLAZA Integrative Orthology | petal development | AT2G03710 |
| GO:0048440 | ISO | PLAZA Integrative Orthology | carpel development | AT2G03710 |
| GO:0009836 | ISO | PLAZA Integrative Orthology | fruit ripening, climacteric | Solyc05g012020.4 |
| GO:0010076 | ISO | PLAZA Integrative Orthology | maintenance of floral meristem identity | AT2G03710 |
| GO:0048443 | ISO | PLAZA Integrative Orthology | stamen development | AT2G03710 |
| GO:0048442 | ISO | PLAZA Integrative Orthology | sepal development | AT2G03710 |
| GO:0010364 | ISO | PLAZA Integrative Orthology | regulation of ethylene biosynthetic process | Solyc05g012020.4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G03710 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |