Gene: Cc11_g00520

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc11_g00520
  • Transcript Identifier Cc11_g00520.1
  • Gene Type Coding gene
  • Location chr11 : 1402998-1406024 : positive

Gene Family Information

  • ID HOM05D000037
  • #Genes/#Species 5045/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q6H9K0
  • UniProtKB D7T9Y0
  • UniProtKB Q39786
  • UniProtKB O49319
  • UniProtKB Q39766
  • UniProtKB D7LFQ2
  • id GSCOCG00007404001

Descriptions

  • Description Putative Exopolygalacturonase (Fragment)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0010098
ISO
PLAZA Integrative Orthologysuspensor development AT2G33160
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G33160
GO:0080159
ISO
PLAZA Integrative Orthologyzygote elongation AT2G33160
GO:0009834
ISO
PLAZA Integrative Orthologyplant-type secondary cell wall biogenesis AT1G78400

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IEA
InterPropolygalacturonase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT2G33160
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT1G78400

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006626 Parallel beta-helix repeat
IPR000743 Glycoside hydrolase, family 28
IPR012334 Pectin lyase fold
IPR011050 Pectin lyase fold/virulence factor
Mapman id Description
21.3.5.3 Cell wall organisation.pectin.modification and degradation.pectin lyase