Gene: Cc08_g16760

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc08_g16760
  • Transcript Identifier Cc08_g16760.1
  • Gene Type Coding gene
  • Location chr8 : 31197871-31199609 : positive

Gene Family Information

  • ID HOM05D000218
  • #Genes/#Species 1867/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB I1JQ42
  • UniProtKB F4YF91
  • UniProtKB Q42202
  • UniProtKB B9DHA6
  • UniProtKB P49636
  • UniProtKB Q45W78
  • id GSCOCG00035649001

Descriptions

  • Description Ubiquitin-60S ribosomal protein L40
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT3G52590

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G36170

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT2G36170
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G36170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011332 Zinc-binding ribosomal protein
IPR029071 Ubiquitin-like domain superfamily
IPR001975 Ribosomal protein L40e
IPR038587 Ribosomal protein L40e superfamily
IPR000626 Ubiquitin-like domain
IPR019956 Ubiquitin domain
Mapman id Description
17.1.2.1.43 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL40