Gene: Cc06_g14680

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc06_g14680
  • Transcript Identifier Cc06_g14680.1
  • Gene Type Coding gene
  • Location chr6 : 12588026-12590407 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB G7JFJ5
  • UniProtKB Q3E6Q1
  • UniProtKB I1MT07
  • UniProtKB F6HYK7
  • UniProtKB Q9SUH6
  • UniProtKB Q7Y211
  • id GSCOCG00041224001

Descriptions

  • Description Pentatricopeptide repeat-containing protein At4g30700
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT4G30700
GO:0000963
ISO
PLAZA Integrative Orthologymitochondrial RNA processing AT4G30700
GO:0016554
ISO
PLAZA Integrative Orthologycytidine to uridine editing AT4G30700

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G30700
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G30700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR032867 DYW domain
IPR002885 Pentatricopeptide repeat
Mapman id Description
16.11.3.3.4.22 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF29)