Gene: Cc06_g02260
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc06_g02260
- Transcript Identifier Cc06_g02260.1
- Gene Type Coding gene
- Location chr6 : 1818355-1822915 : negative
Gene Family Information
- ID HOM05D002600
- #Genes/#Species 262/94
- Phylogenetic origin
- ID ORTHO05D003013
- #Genes/#Species 248/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- UniProtKB Q6PAV2
- UniProtKB Q5GLZ8
- UniProtKB B9SE02
- UniProtKB F6HNU1
- UniProtKB Q15751
- UniProtKB D7THI9
- id GSCOCG00023477001
Descriptions
- Description Putative Probable E3 ubiquitin-protein ligase HERC1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1901141 | ISO | PLAZA Integrative Orthology | regulation of lignin biosynthetic process | AT3G55580 |
| GO:0071497 | ISO | PLAZA Integrative Orthology | cellular response to freezing | AT3G55580 |
| GO:0009631 | ISO | PLAZA Integrative Orthology | cold acclimation | AT3G55580 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G55580 |
| GO:0042393 | ISO | PLAZA Integrative Orthology | histone binding | AT3G55580 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G55580 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |