Gene: AT3G55580

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G55580
  • Transcript Identifier AT3G55580.1
  • Gene Type Coding gene
  • Location Chr3 : 20612766-20615730 : positive

Gene Family Information

  • ID HOM05D002600
  • #Genes/#Species 262/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G55580.1
  • uniprot Q9M2S1

Descriptions

  • Description Regulator of chromosome condensation (RCC1) family protein
  • Computational description Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G53830.1); Has 20178 Blast hits to 6212 proteins in 476 species: Archae - 78; Bacteria - 2696; Metazoa - 7040; Fungi - 1181; Plants - 2975; Viruses - 2; Other Eukaryotes - 6206 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009631
IMP
Gene Ontologycold acclimation1
GO:0071497
IMP
Gene Ontologycellular response to freezing1
GO:1901141
IMP
Gene Ontologyregulation of lignin biosynthetic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0042393
IDA
Gene Ontologyhistone binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005634
IDA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
IPR000408 Regulator of chromosome condensation, RCC1
Mapman id Description
35.1 not assigned.annotated