Gene: Cc05_g12210
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc05_g12210
- Transcript Identifier Cc05_g12210.1
- Gene Type Coding gene
- Location chr5 : 26104580-26106971 : positive
Gene Family Information
- ID HOM05D003356
- #Genes/#Species 204/98
- Phylogenetic origin
- ID ORTHO05D004362
- #Genes/#Species 183/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- UniProtKB B9SRD6
- UniProtKB Q54I48
- UniProtKB Q7SYC9
- UniProtKB B9HZW2
- UniProtKB E0CSM5
- UniProtKB A8XKF2
- id GSCOCG00021220001
Descriptions
- Description Putative Choline transporter-like protein 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010497 | ISO | PLAZA Integrative Orthology | plasmodesmata-mediated intercellular transport | AT3G15380 |
| GO:0090603 | ISO | PLAZA Integrative Orthology | sieve element differentiation | AT3G15380 |
| GO:0010067 | ISO | PLAZA Integrative Orthology | procambium histogenesis | AT3G15380 |
| GO:0050801 | ISO | PLAZA Integrative Orthology | ion homeostasis | AT3G15380 |
| GO:0051510 | ISO | PLAZA Integrative Orthology | regulation of unidimensional cell growth | AT3G15380 |
| GO:0009663 | ISO | PLAZA Integrative Orthology | plasmodesma organization | AT3G15380 |
| GO:0055088 | ISO | PLAZA Integrative Orthology | lipid homeostasis | AT3G15380 |
| GO:0010051 | ISO | PLAZA Integrative Orthology | xylem and phloem pattern formation | AT3G15380 |
| GO:0030100 | ISO | PLAZA Integrative Orthology | regulation of endocytosis | AT3G15380 |
| GO:2000012 | ISO | PLAZA Integrative Orthology | regulation of auxin polar transport | AT3G15380 |
| GO:0048366 | ISO | PLAZA Integrative Orthology | leaf development | AT3G15380 |
| GO:0016192 | ISO | PLAZA Integrative Orthology | vesicle-mediated transport | AT3G15380 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT3G15380 |
| GO:0015031 | ISO | PLAZA Integrative Orthology | protein transport | AT3G15380 |
| GO:0015871 | ISO | PLAZA Integrative Orthology | choline transport | AT3G15380 |
| GO:0010088 | ISO | PLAZA Integrative Orthology | phloem development | AT3G15380 |
| GO:0055085 | IEA | InterPro | transmembrane transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015220 | ISO | PLAZA Integrative Orthology | choline transmembrane transporter activity | AT3G15380 |
| GO:0022857 | IEA | InterPro | transmembrane transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0097218 | ISO | PLAZA Integrative Orthology | sieve plate | AT3G15380 |
| GO:0031901 | ISO | PLAZA Integrative Orthology | early endosome membrane | AT3G15380 |
| GO:0009524 | ISO | PLAZA Integrative Orthology | phragmoplast | AT3G15380 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G15380 |
| GO:0055044 | ISO | PLAZA Integrative Orthology | symplast | AT3G15380 |
| GO:0032588 | ISO | PLAZA Integrative Orthology | trans-Golgi network membrane | AT3G15380 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G15380 |
| GO:0009705 | ISO | PLAZA Integrative Orthology | plant-type vacuole membrane | AT3G15380 |
| GO:0005769 | ISO | PLAZA Integrative Orthology | early endosome | AT3G15380 |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT3G15380 |
| GO:0009551 | ISO | PLAZA Integrative Orthology | secondary plasmodesma | AT3G15380 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007603 | Choline transporter-like |
| Mapman id | Description |
|---|---|
| 24.2.25 | Solute transport.carrier-mediated transport.choline transporter (CHER/CTL1) |