Gene: Cc04_g16400

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc04_g16400
  • Transcript Identifier Cc04_g16400.1
  • Gene Type Coding gene
  • Location chr4 : 26628007-26631524 : positive

Gene Family Information

  • ID HOM05D000067
  • #Genes/#Species 3957/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q39760
  • UniProtKB A5BGV4
  • UniProtKB Q6Q3H2
  • UniProtKB Q6Q3H3
  • UniProtKB E0CSJ0
  • UniProtKB G4XGW4
  • id GSCOCG00035735001

Descriptions

  • Description (-)-germacrene D synthase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045339
ISO
PLAZA Integrative Orthologyfarnesyl diphosphate catabolic process Zm00001eb413120
GO:0016114
ISO
PLAZA Integrative Orthologyterpenoid biosynthetic process Zm00001eb412980
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus Zm00001eb412980
GO:0051762
ISO
PLAZA Integrative Orthologysesquiterpene biosynthetic process Zm00001eb413120
GO:1901937
ISO
PLAZA Integrative Orthologybeta-caryophyllene biosynthetic process Zm00001eb413120
GO:0002213
ISO
PLAZA Integrative Orthologydefense response to insect Zm00001eb413120
GO:0009625
ISO
PLAZA Integrative Orthologyresponse to insect Zm00001eb413120
GO:0080027
ISO
PLAZA Integrative Orthologyresponse to herbivore Zm00001eb413120
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding Zm00001eb278400
GO:0016106
ISO
PLAZA Integrative Orthologysesquiterpenoid biosynthetic process AT5G23960
GO:0016102
IEA
InterProditerpenoid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080017
ISO
PLAZA Integrative Orthologyalpha-humulene synthase activity AT5G23960
GO:0010333
IEA
InterProterpene synthase activity
GO:0080016
ISO
PLAZA Integrative Orthology(-)-E-beta-caryophyllene synthase activity AT5G23960
GO:0000287
IEA
InterPromagnesium ion binding
GO:0016829
IEA
InterProlyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast Zm00001eb278400

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036965 Terpene synthase, N-terminal domain superfamily
IPR044814 Terpene cyclases, class 1, plant
IPR008949 Isoprenoid synthase domain superfamily
IPR034741 Terpene cyclase-like 1, C-terminal domain
IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR001906 Terpene synthase, N-terminal domain
IPR005630 Terpene synthase, metal-binding domain
Mapman id Description
9.1.4.2 Secondary metabolism.terpenoids.terpene biosynthesis.mono-/sesquiterpene-/diterpene synthase