Gene: Cc04_g12230

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc04_g12230
  • Transcript Identifier Cc04_g12230.1
  • Gene Type Coding gene
  • Location chr4 : 13292180-13299335 : positive

Gene Family Information

  • ID HOM05D000779
  • #Genes/#Species 759/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB D7SHP3
  • UniProtKB Q9FP29
  • UniProtKB B9IEU2
  • UniProtKB Q84JS6
  • UniProtKB B9RAZ8
  • UniProtKB P46640
  • id GSCOCG00005272001

Descriptions

  • Description Putative uncharacterized protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010073
ISO
PLAZA Integrative Orthologymeristem maintenance AT1G23380
GO:0010094
ISO
PLAZA Integrative Orthologyspecification of carpel identity AT1G70510
GO:0009736
ISO
PLAZA Integrative Orthologycytokinin-activated signaling pathway AT1G70510
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT1G70510

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G70510
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G23380

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005541 KNOX2
IPR005539 ELK domain
IPR005540 KNOX1
IPR001356 Homeobox domain
IPR009057 Homeobox-like domain superfamily
IPR008422 Homeobox KN domain
Mapman id Description
15.5.3.4 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (KNOX)