Gene: Cc04_g06780

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc04_g06780
  • Transcript Identifier Cc04_g06780.1
  • Gene Type Coding gene
  • Location chr4 : 5134496-5140805 : positive

Gene Family Information

  • ID HOM05D000949
  • #Genes/#Species 633/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB B9SFV5
  • UniProtKB I1L486
  • UniProtKB Q9BWT3
  • UniProtKB Q6PCL9
  • UniProtKB Q54J73
  • UniProtKB G7KM62
  • id GSCOCG00022475001

Descriptions

  • Description poly(A) polymerase 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043631
IEA
InterProRNA polyadenylation
GO:0031123
IEA
InterProRNA 3'-end processing
GO:0048451
ISO
PLAZA Integrative Orthologypetal formation AT1G17980
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT1G17980
GO:0008285
ISO
PLAZA Integrative Orthologynegative regulation of cell population proliferation AT1G17980
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT1G17980
GO:0045824
ISO
PLAZA Integrative Orthologynegative regulation of innate immune response AT1G17980

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0016779
IEA
InterPronucleotidyltransferase activity
GO:0004652
IEA
InterPropolynucleotide adenylyltransferase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G17980

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G17980

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007010 Poly(A) polymerase, RNA-binding domain
IPR002934 Polymerase, nucleotidyl transferase domain
IPR007012 Poly(A) polymerase, central domain
IPR043519 Nucleotidyltransferase superfamily
IPR011068 Nucleotidyltransferase, class I-like, C-terminal
Mapman id Description
16.3.1.1.1 RNA processing.RNA 3'-end processing.mRNA polyadenylation.poly(A) RNA polymerase activity.poly(A) RNA polymerase