Gene: Cc02_g01750

General Information

Structural Information

Species Coffea canephora
Gene Identifier Cc02_g01750
Transcript Identifier Cc02_g01750.1
Gene Type Coding gene
Location chr2 : 1398451-1401039 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

UniProtKB Q9SVP7
UniProtKB Q9ZUW3
UniProtKB B9IDW4
UniProtKB Q5G1T1
UniProtKB I1J411
UniProtKB F6H8E5
id GSCOCG00020005001

Descriptions

Short descriptions
Ortholog descriptions

Description Pentatricopeptide repeat-containing protein At3g49170, chloroplastic

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT3G49170

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT3G49170

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR002885	Pentatricopeptide repeat
IPR032867	DYW domain

Mapman id	Description
16.11.3.3.4.55	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (ECD1)