Gene: Cc01_g05540
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc01_g05540
- Transcript Identifier Cc01_g05540.1
- Gene Type Coding gene
- Location chr1 : 20949103-20961648 : positive
Gene Family Information
- ID HOM05D000189
- #Genes/#Species 2040/100
- Phylogenetic origin
- ID ORTHO05D000474
- #Genes/#Species 882/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB O95714
- UniProtKB B9HNF1
- UniProtKB F6HA19
- UniProtKB Q15751
- UniProtKB Q4U2R1
- UniProtKB B9SM24
- id GSCOCG00027357001
Descriptions
- Description Putative E3 ubiquitin-protein ligase HERC2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G12350 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027988 | Transcription factor BREVIS RADIX, N-terminal domain |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR000408 | Regulator of chromosome condensation, RCC1 |
| IPR001849 | Pleckstrin homology domain |
| IPR011993 | PH-like domain superfamily |
| IPR009091 | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II |
| IPR013591 | Brevis radix (BRX) domain |
| IPR000306 | FYVE zinc finger |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |